[proofplan]
We use the subset expansion of the Tutte polynomial and evaluate it at $(x,y)=(1-q,0)$. Multiplying by $(-1)^{r(E)}$ makes the signs simplify exactly to the alternating subset formula for the characteristic polynomial. The identity follows by comparing the two polynomial expansions term by term.
[/proofplan]
[step:Evaluate the subset expansion of the Tutte polynomial at $(1-q,0)$]
Let $T_M(x,y) \in \mathbb{Z}[x,y]$ denote the Tutte polynomial of $M$, written by its subset expansion:
\begin{align*}
T_M(x,y)=\sum_{A \subset E}(x-1)^{r(E)-r(A)}(y-1)^{|A|-r(A)}.
\end{align*}
Substituting $x=1-q$ and $y=0$ gives
\begin{align*}
T_M(1-q,0)=\sum_{A \subset E}(-q)^{r(E)-r(A)}(-1)^{|A|-r(A)}.
\end{align*}
Multiplying by $(-1)^{r(E)}$, the summand indexed by $A \subset E$ becomes
\begin{align*}
(-1)^{r(E)}(-q)^{r(E)-r(A)}(-1)^{|A|-r(A)}
=
(-1)^{2r(E)-2r(A)+|A|}q^{r(E)-r(A)}.
\end{align*}
Since $2r(E)-2r(A)$ is even, this simplifies to
\begin{align*}
(-1)^{r(E)}T_M(1-q,0)=\sum_{A \subset E}(-1)^{|A|}q^{r(E)-r(A)}.
\end{align*}
[guided]
The point of this step is to make the specialization completely explicit. The Tutte polynomial $T_M(x,y) \in \mathbb{Z}[x,y]$ is defined by summing one term over every subset $A \subset E$:
\begin{align*}
T_M(x,y)=\sum_{A \subset E}(x-1)^{r(E)-r(A)}(y-1)^{|A|-r(A)}.
\end{align*}
At the specialization $(x,y)=(1-q,0)$, the two factors become $x-1=-q$ and $y-1=-1$. Therefore
\begin{align*}
T_M(1-q,0)=\sum_{A \subset E}(-q)^{r(E)-r(A)}(-1)^{|A|-r(A)}.
\end{align*}
Now multiply the whole expression by $(-1)^{r(E)}$. For a fixed subset $A \subset E$, the sign in the corresponding summand is
\begin{align*}
(-1)^{r(E)}(-1)^{r(E)-r(A)}(-1)^{|A|-r(A)}
=
(-1)^{2r(E)-2r(A)+|A|}.
\end{align*}
The integer $2r(E)-2r(A)$ is even, so it contributes no sign. Hence the sign reduces to $(-1)^{|A|}$, and the power of $q$ is unchanged:
\begin{align*}
(-1)^{r(E)}T_M(1-q,0)=\sum_{A \subset E}(-1)^{|A|}q^{r(E)-r(A)}.
\end{align*}
This is the exact alternating subset sum that appears in the characteristic polynomial of a matroid.
[/guided]
[/step]
[step:Identify the resulting subset sum with the characteristic polynomial]
By definition, the characteristic polynomial $\chi_M(q) \in \mathbb{Z}[q]$ of the finite matroid $M$ is
\begin{align*}
\chi_M(q)=\sum_{A \subset E}(-1)^{|A|}q^{r(E)-r(A)}.
\end{align*}
The expression obtained in the previous step is therefore precisely $\chi_M(q)$. Hence
\begin{align*}
\chi_M(q)=(-1)^{r(E)}T_M(1-q,0).
\end{align*}
This proves the claimed polynomial identity.
[/step]