[step:Treat degree zero and assemble the displayed isomorphism]
For degree $0$, interpret $\Gamma(X,\mathcal{A}^{-1})$ as the zero group and the map $\Gamma(X,\mathcal{A}^{-1}) \to \Gamma(X,\mathcal{A}^{0})$ as the zero map. Since $\ker(d_0)=\operatorname{im}(\iota_0)$ and $\iota_0:\mathcal{F}\to\mathcal{A}^0$ is injective, the left exactness of global sections gives an isomorphism
\begin{align*}
\Gamma(X,\mathcal{F})
\xrightarrow{\cong}
\ker\left(D_0:\Gamma(X,\mathcal{A}^{0})\to \Gamma(X,\mathcal{A}^{1})\right).
\end{align*}
By zeroth Čech cohomology is global sections,
\begin{align*}
\check{H}^0(X,\mathcal{F})\cong \Gamma(X,\mathcal{F}),
\end{align*}
and therefore
\begin{align*}
\check{H}^0(X,\mathcal{F})
\cong
\frac{\ker\left(\Gamma(X,\mathcal{A}^{0})\to \Gamma(X,\mathcal{A}^{1})\right)}
{\operatorname{im}\left(\Gamma(X,\mathcal{A}^{-1})\to \Gamma(X,\mathcal{A}^{0})\right)}.
\end{align*}
Now let $q \geq 1$. Combining the isomorphisms constructed above gives
\begin{align*}
\frac{\ker\left(\Gamma(X,\mathcal{A}^{q})\to \Gamma(X,\mathcal{A}^{q+1})\right)}
{\operatorname{im}\left(\Gamma(X,\mathcal{A}^{q-1})\to \Gamma(X,\mathcal{A}^{q})\right)}
&=
\frac{Z^q_\Gamma}{B^q_\Gamma} \\
&\cong
\frac{\Gamma(X,\mathcal{K}^{q})}{\operatorname{im}(P_{q-1})} \\
&\cong
\check{H}^1(X,\mathcal{K}^{q-1}) \\
&\cong
\check{H}^{q}(X,\mathcal{F}).
\end{align*}
Taking the inverse of this composite isomorphism gives the displayed form
\begin{align*}
\check{H}^q(X,\mathcal{F})
\cong
\frac{\ker(\Gamma(X,\mathcal{A}^{q}) \to \Gamma(X,\mathcal{A}^{q+1}))}
{\operatorname{im}(\Gamma(X,\mathcal{A}^{q-1}) \to \Gamma(X,\mathcal{A}^{q}))}.
\end{align*}
This proves that the Čech cohomology of $\mathcal{F}$ is computed by the cohomology of the global-section complex of the acyclic resolution.
[/step]