[guided]Fix $t\in(0,T)$. The goal is to rewrite the integral involving $b\cdot\nabla u$ so that the boundary condition $b\cdot\nu=0$ can be used. Define $w_t:\overline{U}\to\mathbb{R}$ by $w_t(x)=u(x,t)^2$. Let $\mathcal{H}^{n-1}$ denote the $(n-1)$-dimensional Hausdorff measure on $\partial U$. Since $u\in C^1(\overline{U}\times[0,T])$, the time slice $x\mapsto u(x,t)$ belongs to $C^1(\overline{U})$, and hence $w_t\in C^1(\overline{U})$.
The product rule for divergence gives, for every $x\in U$,
\begin{align*}
\operatorname{div}(b\,w_t)(x)=(\operatorname{div} b)(x)w_t(x)+b(x)\cdot\nabla w_t(x).
\end{align*}
By the chain rule applied to $w_t(x)=u(x,t)^2$,
\begin{align*}
\nabla w_t(x)=2u(x,t)\nabla u(x,t).
\end{align*}
Therefore
\begin{align*}
u(x,t)\,b(x)\cdot\nabla u(x,t)=\frac{1}{2}b(x)\cdot\nabla w_t(x).
\end{align*}
Substituting this into the product-rule identity and integrating over $U$ with respect to $\mathcal{L}^n$ gives
\begin{align*}
\int_U u(x,t)\,b(x)\cdot\nabla u(x,t)\,d\mathcal{L}^n(x)
=
\frac{1}{2}\int_U \operatorname{div}(b\,w_t)(x)\,d\mathcal{L}^n(x)
-
\frac{1}{2}\int_U(\operatorname{div}b)(x)w_t(x)\,d\mathcal{L}^n(x).
\end{align*}
We now apply the [Gauss-Green Theorem](/theorems/28). Its hypotheses are satisfied because $U$ is bounded with smooth boundary and $b\,w_t:\overline{U}\to\mathbb{R}^n$ is a $C^1$ vector field. The theorem gives
\begin{align*}
\int_U \operatorname{div}(b\,w_t)(x)\,d\mathcal{L}^n(x)
=
\int_{\partial U} w_t(x)b(x)\cdot\nu(x)\,d\mathcal{H}^{n-1}(x).
\end{align*}
The boundary condition says $b(x)\cdot\nu(x)=0$ for every $x\in\partial U$, so the boundary integral is zero. Since $w_t(x)=|u(x,t)|^2$, the transport integral becomes
\begin{align*}
\int_U u(x,t)\,b(x)\cdot\nabla u(x,t)\,d\mathcal{L}^n(x)
=
-\frac{1}{2}\int_U(\operatorname{div}b)(x)|u(x,t)|^2\,d\mathcal{L}^n(x).
\end{align*}[/guided]